Author

W. T. Ireland

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:ChIP-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Organism:E. coli· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 1

Frequent Co-Authors

J. B. Kinney· 3 shared N. M. Belliveau· 3 shared R. Phillips· 3 shared A. Moradian· 2 shared M. J. Sweredoski· 2 shared S. L. Barnes· 2 shared D. L. Jones· 1 shared E. Flores-Bautista· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersBiophysics

J. B. Kinney

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3 papers

Recent·Most cited

BiophysicsbioRxivJan 18, 2020

Deciphering the regulatory genome of Escherichiacoli, one hundred promoters at a time

W. T. Ireland, S. M. Beeler, E. Flores-Bautista…·R. Phillips

The paper introduces a method to characterize promoter regulation in E. coli by analyzing 100 promoters across 12 growth conditions, identifying regulatory elements and transcription factors.

DOI 10.7554/elife.55308

E. coliDNA methylation

𝕏 PostBluesky

BiophysicsbioRxivMay 25, 2018

Mapping DNA sequence to transcription factor binding energy in vivo

S. L. Barnes, N. M. Belliveau, W. T. Ireland…·R. Phillips

This study develops a method to map DNA sequences to transcription factor binding energy using in vivo data, achieving predictions within 1 kBT of measured values and exploring sequence-context relationships.

DOI 10.1371/journal.pcbi.1006226

DNA methylationChIP-seq

𝕏 PostBluesky

BiophysicsbioRxivJan 6, 2018

A systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria

N. M. Belliveau, S. L. Barnes, W. T. Ireland…·R. Phillips

The paper introduces a systematic method combining assays and modeling to dissect bacterial promoter mechanisms at nucleotide resolution.

DOI 10.1073/pnas.1722055115

E. coliexperimental assay

𝕏 PostBluesky