Author

Wenjing Ye

Fudan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Aleix Rius RigauiD· 1 shared Alexandru-Emil Matei· 1 shared Bosen LiiD· 1 shared Dandan ZhangiD· 1 shared Duo Du· 1 shared Haozhe YuaniD· 1 shared Hejian Zou· 1 shared Houbao LiuiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperImmunology

Aleix Rius RigauORCID

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2 papers

Recent·Most cited

Mapping spatially-resolved transcriptomes in systemic sclerosis

Zhijian Li, Aleix Rius Rigau, Wenjie Xie, Linlin Huang, Xian Shao, Yinan Li, Alexandru-Emil Matei, Wenjing Ye, Hejian Zou, Luca Pinello, Jörg H. W. Distler, Rui He, Minrui Liang

The paper maps spatially-resolved transcriptomes in systemic sclerosis to identify a fibrotic niche and disease-specific cell states, linking them to clinical outcomes.

bioRxiv · Jan 14, 2025 · PreprintImmunology

CRISPR-based targeted haplotype-resolved assemblies of a megabase region

Taotao Li, Duo Du, Dandan Zhang, Yicheng Lin, Jiakang Ma, Mengyu Zhou, Weida Meng, Zelin Jin, Ziqiang Chen, Haozhe Yuan, Jue Wang, Shulong Dong, Shaoyang Sun, Wenjing Ye, Bosen Li, , Yun Liu

This paper demonstrates a CRISPR-based method to construct haplotype-resolved assemblies of targeted genomic regions, achieving comparable accuracy with reduced cost and complexity.

Nature Communications · Jan 3, 2023Peer-reviewedGenomics