Author

Yibo Xuan

Nankai University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Shan GaoiD· 3 shared Samuel KelavaiD· 2 shared Stephen C. BarkeriD· 2 shared Ze CheniD· 2 shared Bingjun He· 1 shared Chang LiuiD· 1 shared Defu CheniD· 1 shared Fang Wang· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersBioinformatics

Shan GaoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A negative feedback model to explain regulation of SARS-CoV-2 replication and transcription

Shan Gao, Zhi Cheng, Xiufeng Jin, Fang Wang, Yibo Xuan, Hao Zhou, Chang Liu, Jishou Ruan, Guangyou Duan, Xin Li

The paper proposes a negative feedback model explaining SARS-CoV-2 replication and transcription regulation through nsp15 cleavage of transcription regulatory sequences.

Frontiers in Genetics · Feb 26, 2021Peer-reviewedBioinformatics

Full-length genome sequence of segmented RNA virus from ticks was obtained using small RNA sequencing data

Xiaofeng Xu, Jinlong Bei, Yibo Xuan, Jiayuan Chen, Defu Chen, Stephen C. Barker, Samuel Kelava, Bingjun He, Shan Gao, Ze Chen

The paper uses small RNA sequencing to obtain the full-length genome sequence of a novel tick-borne flavivirus and demonstrates the feasibility of using sRNA-seq for virus detection in low-RNA samples.

BMC Genomics · Sep 16, 2020Peer-reviewedBioinformatics

Precise annotation of tick mitochondrial genomes reveals multiple STR variation and one transposon-like element

Ze Chen, Yibo Xuan, Guangcai Liang, Xiaolong Yang, Zhijun Yu, Stephen C. Barker, Samuel Kelava, Wenjun Bu, Jingze Liu, Shan Gao

The paper annotates tick mitochondrial genomes using long-PCR and NGS, revealing novel STR variation and a transposon-like element, and links STR mutations to aging and disease.

BMC Genomics · Jul 17, 2020Peer-reviewedMolecular Biology