Author

Yujiro Takegami

Dnaform (Japan)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:database / resource· 1 Organism:mouse· 1

Frequent Co-Authors

Ai Kanemaru· 2 shared Hideya KawajiiD· 2 shared Juha KereiD· 2 shared Shintaro KatayamaiD· 2 shared Shruti BhagatiD· 2 shared Yasuhiro MurakawaiD· 2 shared Akifumi Takaori‐KondoiD· 1 shared Anastassius Damdimopoulos· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersDevelopmental Biology

Ai Kanemaru

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2 papers

Recent·Most cited

DUX4 regulates oocyte to embryo transition in human

Sanna Vuoristo, Christel Hydén‐Granskog, Masahito Yoshihara, Shruti Bhagat, Lisa M. Gawriyski, Eeva‐Mari Jouhilahti, Anastassius Damdimopoulos, Vipin Ranga, Mahlet Z. Tamirat, Mikko T Huhtala, Kosuke Hashimoto, Kaarel Krjutškov, Gaëlle Recher, Sini Ezer, Priit Paluoja, , Juha Kere

This study shows that DUX4 regulates the oocyte-to-embryo transition in humans by activating enhancers and promoting genome reprogramming.

bioRxiv · Feb 13, 2020 · PreprintDevelopmental Biology

Dynamics and Topology of Human Transcribed Cis-regulatory Elements

Shigeki Hirabayashi, Shruti Bhagat, Yu Matsuki, Yujiro Takegami, Takuya Uehata, Ai Kanemaru, Masayoshi Itoh, Kotaro Shirakawa, Akifumi Takaori‐Kondo, Osamu Takeuchi, Piero Carninci, Shintaro Katayama, Yoshihide Hayashizaki, Juha Kere, Hideya Kawaji, Yasuhiro Murakawa

The paper develops NET-CAGE to detect nascent RNA 5-ends, identifies enhancer-promoter pairs, and reveals topological connections of cis-regulatory elements across cell types.

bioRxiv · Jul 3, 2019 · PreprintGenomics