Author

Rebecca Chen

University of CalgaryORCID 0000-0001-6057-9569Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Rebecca Chen1 paper · University of California, San Francisco

Biology Disciplines

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Genomics· 2 Molecular Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 3 Approach:statistical model· 3 Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1

Frequent Co-Authors

John S. GilleardiD· 5 shared Elizabeth Redman· 4 shared Abhinaya VenkatesaniD· 3 shared Pablo David Jimenez CastroiD· 2 shared Ray M. KaplaniD· 2 shared Russell W. AvramenkoiD· 2 shared Abigail Malatesta· 1 shared Arianna MorosettiiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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5 shared papersMolecular Biology

John S. GilleardORCID

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5 papers

Recent·Most cited

Molecular BiologyInternational Journal for ParasitologyPeer-reviewedApr 15, 2026

The development and validation of long-read ITS-1/5.8S/ITS-2 nemabiome metabarcoding using Oxford Nanopore Technologies (ONT) sequencing for ovine gastrointestinal nematodes and the design of primers suitable for its direct application to fecal DNA.

Eléonore Charrier, Rebecca Chen, Elizabeth Redman…·John S. Gilleard

2 citationstop 1%

metagenomicsexperimental assay

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GenomicsbioRxivPreprintJul 4, 2024

Discovery of a novel Trichuris species, T. incognita, with low sensitivity to albendazole-ivermectin treatment in Cote d'Ivoire patients, identified through fecal DNA metabarcoding

Abhinaya Venkatesan, Rebecca Chen, Max Baer…·John S. Gilleard

1 citation

humannon-human primate

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GenomicsbioRxivPreprintOct 12, 2022

Molecular evidence of widespread benzimidazole drug resistance in Ancylostoma caninum from domestic dogs throughout the USA and discovery of a novel isotype-1 β-tubulin benzimidazole resistance mutation.

Abhinaya Venkatesan, Pablo David Jimenez Castro, Arianna Morosetti…·John S. Gilleard

This paper identifies widespread benzimidazole resistance in Ancylostoma caninum from dogs across the USA, including a novel β-tubulin mutation and confirms its functional significance.

2 citations

statistical model

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Molecular BiologyInternational Journal for Parasitology Drugs and Drug ResistancePeer-reviewedSep 2, 2021

Multiple drug resistance in hookworms infecting greyhound dogs in the USA

Pablo David Jimenez Castro, Abhinaya Venkatesan, Elizabeth Redman…·Ray M. Kaplan

This study identifies high prevalence and intensity of multiple-drug-resistant Ancylostoma caninum in greyhound dogs in the USA, with strong genetic and phenotypic evidence of resistance.

73 citationstop 1%

statistical model

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BioinformaticsBMC GeneticsPeer-reviewedJul 10, 2020

A database for ITS2 sequences from nematodes

Matthew L. Workentine, Rebecca Chen, Shawna Zhu…·John S. Gilleard

The paper presents a database of ITS2 sequences from nematodes and the software used to build it, along with tools to create ITS2 databases for other taxonomies.

100 citationstop 2%

DNA methylationexperimental assay

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