Author

Ryan Basom

Fred Hutch Cancer CenterORCID 0000-0001-6137-1807Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Alexandre V. Vinaud HirayamaiD· 1 shared Andria Ellis· 1 shared Anna ElziD· 1 shared Annalyssa N. Long· 1 shared Bobbie‐Jo Webb‐RobertsoniD· 1 shared Cole TrapnelliD· 1 shared Danielle M. ZerriD· 1 shared David Richard GlassiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperImmunology

Alexandre V. Vinaud HirayamaORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

ImmunologybioRxivPreprintJul 9, 2026

Coordinated expansion of CD163⁺ monocytes and immature CD177⁺ neutrophils marks severe neurotoxicity after CD19 CAR T cell therapy

Tony Chour, Nikhita H. Poole, Hugh R. MacMillan…·Sylvain Simon

The paper identifies CD163+ monocytes and immature CD177+ neutrophils as markers of severe neurotoxicity after CD19 CAR T cell therapy through multi-omics profiling.

DOI 10.64898/2026.07.07.737099

humanflow cytometry

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NeuroscienceProceedings of the National Academy of SciencesPeer-reviewedFeb 7, 2020

Connect-seq to superimpose molecular on anatomical neural circuit maps

Naresh Kumar Hanchate, Eun Jeong Lee, Andria Ellis…·Linda B. Buck

Connect-seq combines viral tracing and single-cell transcriptomics to map molecular identities and signaling molecules in neural circuits, revealing upstream neuron subsets and their anatomical locations in the hypothalamus.

41 citations

mousescRNA-seq

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GenomicsJournal of VirologyPeer-reviewedNov 9, 2018

RNA sequencing of the in vivo human herpesvirus 6B transcriptome to identify targets for clinical assays distinguishing between latent and active infections

Joshua Aiden Hill, Minako Ikoma, Danielle M. Zerr…·Serge Barcy

This study uses RNA sequencing to analyze HHV-6B transcriptomes in various samples to identify diagnostic targets distinguishing latent from active infections.

19 citations

humanbulk RNA-seq

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