Author
Oren Ram
Hebrew University of JerusalemORCID 0000-0001-6341-5252Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2020-2026 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 28 mutual co-author links9 papers
Recent·Most cited
- Synthetic BiologybioRxivPreprint
Compact Oligomerized-Motif Promoters for Adjustable Control of Transcription (COMPACT) for Robust, Tunable and Bidirectional Gene Expression in Mammalian Cells
Chaja Katzman, Sharon Matusevich, Shir-Liya Dadon…·Lior Nissim
The paper introduces COMPACT promoters for tunable and robust gene expression in mammalian cells, showing they outperform native promoters under stress conditions.
DOI 10.64898/2026.08.17.745230 - GeneticsNucleic Acids ResearchPeer-reviewed
Expanding single-cell toolbox with a cost-effective full-length total RNA droplet-based sequencing technology
Xue Sun, Shir-Liya Dadon, Dena Ennis…·Oren Ram
sc-rDSeq improves single-cell RNA sequencing by capturing full-length total RNA, revealing hidden heterogeneity and non-polyA RNA variations in lung cancer cells.
- GenomicsNucleic Acids ResearchPeer-reviewed
Bimodal Specificity of TF-DNA Recognition in Embryonic Stem Cells
Mikhail A. Povolotskiy, Maor Yehezkehely, Oren Ram, David B. Lukatsky
The paper shows that key pluripotency TFs exhibit bimodal DNA binding preferences based on GC-content and STRs, while c-Myc binding is dominated by GC-content and STRs in high-GC regions.
- GeneticsNature AgingPeer-reviewed
The killifish germline regulates longevity and somatic repair in a sex-specific manner
Eitan Moses, Tehila Atlan, Xue Sun…·Itamar Harel
This study shows that germline manipulation in killifish leads to sex-specific effects on longevity and repair mechanisms.
37 citationstop 4% - Molecular BiologyPLoS GeneticsPeer-reviewed
DNA Methylation Patterns Expose Variations in Enhancer-Chromatin Modifications during Embryonic Stem Cell Differentiation
Adi Alajem, Hava Roth, Sofia Ratgauzer…·Oren Ram
The paper identifies enhancer-specific DNA methylation variations during mouse embryonic stem cell differentiation using combined histone mark and methylation analysis.
- Molecular BiologybioRxivPreprint
CloneSeq: A Highly Sensitive Single-cell Analysis Platform for Comprehensive Characterization of Cells from 3D Culture
Danny Bavli, Xue Sun, Chen Kozulin…·Oren Ram
CloneSeq identifies rare cell subpopulations by combining clonal expansion with single-cell RNA-seq, revealing cancer stem-like cells and improved stemness in embryonic cells.
- Molecular BiologybioRxivPreprint
Esrrb is a cell cycle dependent priming factor balancing between pluripotency and differentiation
Sapir Herchcovici Levy, Sharon Feldman, Lee Arnon…·Oren Ram
This study shows Esrrb promotes XEN differentiation in G2/M phase ESCs and is required for XEN differentiation potential, while its absence leads to loss of differentiation capacity.
- GenomicsBiophysical JournalPeer-reviewed
Rewiring of transcription factor binding in differentiating human embryonic stem cells is constrained by DNA sequence repeat symmetry
Matan Goldshtein, Meir Mellul, Gai Deutch…·David B. Lukatsky
The paper shows that DNA sequence repeat symmetry defines transcription factor and histone modification binding preferences across developmental layers in human embryonic stem cells.
11 citations