Author

Supriya Khedkar

European Molecular Biology LaboratoryORCID 0000-0001-6606-2202Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Supriya Khedkar1 paper

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Organism:E. coli· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Anthony FullamiD· 2 shared Askarbek N OrakoviD· 2 shared Peer Bork BiD· 2 shared Anastasiia GrekovaiD· 1 shared Aswin Sai Narain SeshasayeeiD· 1 shared Chan Yeong KimiD· 1 shared Christian SchudomaiD· 1 shared Damian SzklarczykiD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersMicrobiology

Anthony FullamORCID

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3 papers

Recent·Most cited

MicrobiologyCellPeer-reviewedFeb 9, 2026

Planetary microbiome structure and generalist-driven gene flow across disparate habitats

Chan Yeong Kim, Daniel Podlesny, Jonas Schiller…·Peer Bork B

The paper analyzes planetary microbiome structure and gene flow across habitats using metagenomic data, identifying generalist microbes as key drivers of gene transfer.

15 citationstop 1%

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedJun 13, 2021

GUNC: Detection of Chimerism and Contamination in Prokaryotic Genomes

Askarbek N Orakov, Anthony Fullam, Luis Pedro Coelho…·Peer Bork B

GUNC detects and quantifies chimerism in prokaryotic genomes by analyzing contig lineage homogeneity, improving genome quality.

306 citationstop 1%

bacteria (other)whole-genome sequencing

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GeneticsmSpherePeer-reviewedNov 22, 2017

Repression of YdaS Toxin is Mediated by Transcriptional Repressor RacR in the cryptic rac prophage of Escherichia coli K12

Revathy Krishnamurthi, Swagatha Ghosh, Supriya Khedkar, Aswin Sai Narain Seshasayee

The paper shows that RacR represses the ydaS toxin gene in the rac prophage of E. coli K12, preventing lethality upon its deletion.

15 citations

E. coliexperimental assay

𝕏 PostBluesky