Author

Judy Luu

Broad InstituteORCID 0000-0001-6761-6393Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Evan Z. MacoskoiD· 2 shared Michael-John DolaniD· 2 shared Aleksandrina GoevaiD· 1 shared Alex R. BuckleyiD· 1 shared Amanda UrkeiD· 1 shared Benjamin E. DevermaniD· 1 shared Beth StevensiD· 1 shared Binhui ZhaoiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersNeuroscience

Evan Z. MacoskoORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintFeb 27, 2026

Protein-guided RNA barcoding links transcriptomes to synaptic architecture

Amanda Urke, Michael-John Dolan, Jonah Silverman…·Evan Z. Macosko

The paper introduces Synapse-seq, a method to link transcriptomes to synaptic architecture by using protein-guided RNA barcoding, revealing new insights into neural connectivity and cell type-specific dendritic structures.

1 citation

mousespatial transcriptomics

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BioinformaticsbioRxivPreprintJan 6, 2023

HiDDEN: A machine learning label refinement method for detection of disease-relevant populations in case-control single-cell transcriptomics

Aleksandrina Goeva, Michael-John Dolan, Judy Luu…·Evan Z. Macosko

HiDDEN refines case-control labels in single-cell transcriptomics to detect disease-relevant cell populations, improving detection of subtle perturbations in simulated and real datasets.

3 citations

humanmouse

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