BiophysicsBiophysical JournalPeer-reviewed
Exploring protein-mediated compaction of DNA by coarse-grained simulations and unsupervised learning
Marjolein de Jager, Pauline J. Kolbeck, Willem Vanderlinden…·Laura Filion
The paper uses coarse-grained simulations and unsupervised learning to study protein-mediated DNA compaction, finding that protein-protein interactions are critical for forming looped structures observed experimentally.