Author

Ali Palla

California Institute of TechnologyORCID 0000-0001-7380-3881Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:Hi-C· 1 Organism:human· 1

Frequent Co-Authors

Alexander A. Shishkin· 1 shared Alma L. BurlingameiD· 1 shared Amy Y. ChowiD· 1 shared Barbara Tabak· 1 shared Chien-Chu LiniD· 1 shared Christine S. ChengiD· 1 shared Danica Galonić FujimoriiD· 1 shared Elizabeth Detmar· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alexander A. Shishkin

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2 papers

Recent·Most cited

BiochemistryJournal of Molecular BiologyPeer-reviewedJun 20, 2025

An intrinsically disordered region of histone demethylase KDM5A activates catalysis through interactions with the nucleosomal acidic patch and DNA

Ali Palla, Chien-Chu Lin, Michael J. Trnka…·Danica Galonić Fujimori

This study identifies an intrinsically disordered region in KDM5A that binds the nucleosome's acidic patch and DNA, enabling catalytic activity through multivalent interactions.

3 citations

humanChIP-seq

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GenomicsCellPeer-reviewedJun 7, 2018

Higher-order inter-chromosomal hubs shape 3-dimensional genome organization in the nucleus

Sofia A. Quinodoz, Noah Ollikainen, Barbara Tabak…·Mitchell Guttman

The paper introduces SPRITE, a method for detecting higher-order DNA interactions, and shows that nuclear bodies act as inter-chromosomal hubs shaping 3D genome organization.

893 citationstop 1%

Hi-Cexperimental assay

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