Author

Chen-yi Anita Liao

Leiden UniversityORCID 0000-0001-7440-4065Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Assay:imaging· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Erik H.J. DaneniD· 2 shared Beatrice Coornaert· 1 shared Bi-rong WangiD· 1 shared Elsa NeubertiD· 1 shared Federica EduatiiD· 1 shared Jasmijn H.M. HundscheidiD· 1 shared Justin Crawford· 1 shared Peter ten DijkeiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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2 shared papersSystems Biology

Erik H.J. DanenORCID

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2 papers

Recent·Most cited

Systems BiologyBioinformaticsPeer-reviewedJun 23, 2026

Informing agent-based models with spatial data using convolutional autoencoders

Bi-rong Wang, Chen-yi Anita Liao, Erik H.J. Danen…·Federica Eduati

This paper presents a framework to optimize agent-based models using spatial data by comparing imaging data and model outputs in a shared latent space, showing improved reproduction of spatial features.

1 citation

humanspatial transcriptomics

𝕏 PostBluesky

Cell BiologyMaterials Today BioPeer-reviewedApr 24, 2025

Novel high throughput 3D ECM remodeling assay identifies MEK as key driver of fibrotic fibroblast activity

Chen‐Yi Liao, Jasmijn H.M. Hundscheid, Justin Crawford…·Erik H.J. Danen

The paper develops a high-throughput 3D ECM remodeling assay to identify MEK as a key driver of fibrotic fibroblast activity, showing that MEK-ERK signaling, not TGFβ signaling, drives ECM remodeling.

2 citations

humanexperimental assay

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