Ulrike Löber

This study analyzes global infant gut microbiota to reveal lifestyle-specific maturation patterns and identifies delays in maturation in malnourished and preterm infants.

The paper compares ARG detection pipelines and finds large discrepancies in reported ARG counts and composition across different habitats.

This paper introduces a decontamination method for long-read metagenomic datasets, identifying and mitigating microbial contaminants in neonatal samples.

The paper compares gut microbiota and short-chain fatty acid (SCFA) patterns in Polish and Japanese children, finding similar SCFA trajectories despite divergent microbial communities.

The paper uses long-read metagenomics to analyze pet dog gut microbiomes, generating high-quality MAGs and identifying antimicrobial resistance elements in a Shanghai cohort.

This study identifies cefiderocol resistance genes in environmental samples using functional metagenomics, revealing beta-lactamases and mobile genetic elements.

This study investigates how baseline gut microbiome composition affects resilience to and recovery from antibiotic treatment, identifying key taxa and functional modules associated with resilience.

This study links gut microbiota dysbiosis and altered tryptophan metabolism to increased inflammation in severe COVID-19 patients.