Benjamin Grodner

High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing

The paper introduces a method to map microbiome-host interactions in the gut at high spatial resolution using in situ polyadenylation and spatial RNA sequencing, revealing microbial biogeography and host-microbe interactions in a mouse model.

Microscale Spatial Dysbiosis in Oral biofilms Associated with Disease

The paper examines spatial bacterial arrangement in oral biofilms from healthy and diseased implants, finding that disease is associated with single-genus patches and proposing spatial structure as a biomarker for microbiome stability.

Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis

This study uses spatiotemporal single-cell RNA sequencing to analyze chicken heart development, revealing the interplay between cellular differentiation and morphogenesis.