Author

Anuradha Budhu

National Cancer InstituteORCID 0000-0001-7724-751XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Eytan RuppiniD· 2 shared Jittiporn ChaisaingmongkoliD· 2 shared Marshonna ForguesiD· 2 shared Mathuros RuchirawatiD· 2 shared Xin Wei WangiD· 2 shared Chulabhorn MahidoliD· 1 shared Curtis C. HarrisiD· 1 shared Darko CastveniD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersCancer Biology

Eytan RuppinORCID

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2 papers

Recent·Most cited

Cell type-centric interaction networks define spatial architecture of intrahepatic cholangiocarcinoma

Hsin-Pei Lee, Meng Liu, Wenqi Wu, Ngoc Thao Lam Nguyen, Jittiporn Chaisaingmongkol, Darko Castven, Ethan Levy, Noémi Kedei, Maria Olga Hernandez, Manjari Kundu, Marshonna Forgues, Man‐Hsin Hung, Anuradha Budhu, Nada Alani, Stephen M. Hewitt, , Lichun Ma

This study defines the spatial architecture of intrahepatic cholangiocarcinoma using single-cell spatial proteomics and a graph-based deep learning framework to identify multicellular spatial patterns and their association with patient outcomes.

bioRxiv · Jun 6, 2026 · PreprintCancer Biology

Functional Genomic Complexity Defines Intratumor Heterogeneity and Tumor Aggressiveness in Liver Cancer

So Mee Kwon, Anuradha Budhu, Hyun Goo Woo, Jittiporn Chaisaingmongkol, Hien Thanh Dang, Marshonna Forgues, Curtis C. Harris, Gao Zhang, Noam Auslander, Eytan Ruppin, Chulabhorn Mahidol, Mathuros Ruchirawat, Xin Wei Wang

The paper introduces a functional genomic complexity (FGC) score to assess genomic heterogeneity in liver cancer, finding higher FGC correlates with worse prognosis and immune evasion.

Scientific Reports · Nov 15, 2019Peer-reviewedGenomics