Author

Philip Joseph Rosenthal

University of California, San FranciscoORCID 0000-0001-7840-5401Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Karamoko NiaréiD· 2 shared Melissa D. ConradiD· 2 shared ABDOULAYE A. DJIMDÉiD· 1 shared Abebe Alemu FolaiD· 1 shared Abhai Tripathi· 1 shared Akshaya RameshiD· 1 shared Alejandro McCotter-Gonzalez· 1 shared Anita GhansahiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

Karamoko NiaréORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintSep 9, 2026

A Plasmodium falciparum PX1 haplotype is associated with reduced susceptibility to artemisinin and lumefantrine

Christopher Bower-Lepts, Arvind Jangra, Sachie Kanatani…·Sachel Mok

This study identifies a PX1 haplotype in Plasmodium falciparum associated with reduced susceptibility to artemisinin and lumefantrine, providing a marker for drug resistance surveillance.

3 citations

humanDNA methylation

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Genetic & Genomic MedicineFrontiers in GeneticsPeer-reviewedJun 12, 2025

Highly multiplex molecular inversion probe panel in Plasmodium falciparum targeting common SNPs approximates whole genome sequencing assessments for selection and relatedness

Karamoko Niaré, Rebecca Crudale, Abebe Alemu Fola…·Jeffrey A. Bailey

The paper develops a targeted sequencing panel for Plasmodium falciparum that approximates whole genome sequencing for population genetics analyses.

10 citationstop 2%

plant (other)whole-genome sequencing

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GenomicsbioRxivPreprintAug 6, 2018

Etiology of fever in Ugandan children: identification of microbial pathogens using metagenomic next-generation sequencing and IDseq, a platform for unbiased metagenomic analysis

Akshaya Ramesh, Sara Nakielny, Jennifer Hsu…·Joseph L. DeRisi

This study uses metagenomic sequencing and the IDseq platform to identify microbial pathogens in Ugandan children with fever, revealing common pathogens and novel viruses.

7 citations

humanmetagenomics

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