Jaeil Ahn

The paper uses laser microdissection and proteomics to compare tumor and stroma in HNSCC tissues, identifying ECM enrichment in stroma and potential targets for disease intervention.

The paper identifies a genomic variant in ALPK2 associated with increased liver fibrosis risk in HIV/HCV coinfected women using clinical data from the WIHS cohort.

DeMixT improves transcriptomic deconvolution by estimating component proportions and expression profiles in heterogeneous samples, showing high accuracy in validation and TCGA data.

This paper introduces an RNA-seq mixture experiment using two cancer cell lines to benchmark library preparation kits and analysis methods, finding that total RNA kits and voom with quality weights perform best.