Author

Allison L. Hunt

Inova Health SystemORCID 0000-0002-2223-7944Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 4 Assay:proteomics· 4 Research Focus:cell type annotation· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:deconvolution· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Thomas P. ConradsiD· 4 shared Nicholas W. BatemaniD· 3 shared Tamara S. AbuleziD· 3 shared Brian L. HoodiD· 2 shared Christopher M. Tarney· 2 shared George Larry MaxwelliD· 2 shared Joshua P. Schaaf· 2 shared Kathleen M. DarcyiD· 2 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersCancer Biology

Thomas P. ConradsORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Proteomic Profiling Identifies CLDN3 as a Tumor-Selective Therapeutic Target in Small Cell Lung Cancer

Brett Schroeder, Jae Choi, Alejandro A. Schäffer, Michael Nirula, Yingying Cao, Yang Zhang, Anna-Lena Meinhardt, Hyeokjun Kwon, Hyerim Park, Sangin Lee, Hyo Jin Shin, Hee Geon Park, Hobin Yang, Sungyoul Hong, Parth Desai, , Anish Thomas

The paper identifies CLDN3 as a tumor-selective target in SCLC using proteogenomic analysis and validates its therapeutic potential with a monoclonal antibody.

bioRxiv · Jul 30, 2026 · PreprintCancer Biology

ShapeUpLMD: An Automated Pipeline for Spatially Optimized Laser Microdissection in Multi-omic Tissue Profiling

Joshua P. Schaaf, Dave Mitchell, Jonathan D. Ogata, Sakiyah TaQee, Katlin N. Wilson, Kelly A. Conrads, Jeremy Loffredo, Brian L. Hood, Tamara S. Abulez, Allison L. Hunt, Andrea Langeland, Paulette Y. Mhawech-Fauceglia, Kathleen M. Darcy, Christopher M. Tarney, George Larry Maxwell, , Nicholas W. Bateman

ShapeUpLMD automates ROI optimization for laser microdissection, improving tumor purity and spatial accuracy in multi-omic tissue profiling.

bioRxiv · Jan 27, 2026 · PreprintCancer Biology

dia-PASEF Proteomics of Tumor and Stroma LMD Enriched from Archived HNSCC Samples

Aswini Panigrahi, Allison L. Hunt, Diego M. Assis, Matthew Willetts, Bhaskar Kallakury, Bruce J. Davidson, Jaeil Ahn, Thomas P. Conrads, Radoslav Goldman

The paper uses laser microdissection and proteomics to compare tumor and stroma in HNSCC tissues, identifying ECM enrichment in stroma and potential targets for disease intervention.

ACS Omega · Mar 25, 2025Peer-reviewedCancer Biology

ProteoMixture: A Cell Type Deconvolution Tool for Bulk Tissue Proteomics Data

Pang-ning Teng, Joshua P. Schaaf, Tamara S. Abulez, Brian L. Hood, Katlin N. Wilson, Tracy J. Litzi, David Mitchell, Kelly A. Conrads, Allison L. Hunt, Victoria Olowu, Julie Oliver, Fred S. Park, Marshé Edwards, AiChun Chiang, Matthew D. Wilkerson, , Nicholas W. Bateman

ProteoMixture estimates cell type proportions in bulk tissue proteomics data using optimized protein signatures validated on high-grade serous ovarian cancer samples.

iScience · Feb 12, 2024Peer-reviewedBioinformatics