Alexis Dereeper

The paper generates a chromosome-scale genome assembly for an Australian finger lime and uses resequencing to catalog genetic diversity in Oceanian citrus, revealing population structure and hybridization patterns.

The paper traces the evolutionary history of Xanthomonas oryzae pv. oryzae in Africa, showing its adaptation to African rice and how the introduction of Asian rice shaped its population structure.

The paper constructs a citrus super-pangenome from four ancestral species, revealing evolutionary patterns and genetic diversity through gene annotation, resequencing, and PAV analysis.

Rice Galaxy provides an open resource for plant science, enabling researchers to perform advanced genomic analyses using shared datasets and tools.