Author
University of California, Santa CruzORCID 0000-0001-8274-1838Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Cindy E Liang, Eva Hrabeta‐Robinson, Selam Mehreteab…·Angela Norie Brooks
This study shows U2AF1S34F enhances lung cell tumorigenicity when combined with KRAS mutations and environmental stress, altering splicing and stress responses.
Alison D. Tang, Cameron M. Soulette, Marijke J. van Baren…·Angela Norie Brooks
The paper uses nanopore sequencing to analyze full-length transcripts in CLL samples with and without SF3B1 mutations, revealing altered intron retention and splicing patterns.
Yiqun Zhang, Fengju Chen, Nuno A. Fonseca…·Paul Alan Edwards
The paper identifies hundreds of genes deregulated by SVs in cancer, showing increased expression linked to SV breakpoints and enhancer elements.
Cameron M. Soulette, Eva Hrabeta‐Robinson, Alison D. Tang…·Angela Norie Brooks
The paper uses long-read sequencing to identify U2AF1 S34F mutation-induced isoform changes in lung cancer, revealing novel transcripts and functional consequences.
Rachael E. Workman, Alison D. Tang, Paul S. Tang…·Winston Timp
The paper uses nanopore sequencing to analyze poly(A) RNA from human cells, identifying long transcripts and modifications not captured by traditional methods.
PCAWG Transcriptome Core Group, Claudia Calabrese, Natalie R. Davidson…·Zemin Zhang
The paper analyzes RNA alterations across 27 cancer types using whole-genome sequencing data, identifying gene expression associations with DNA variants and structural fusions.