Author

Palmer Carlyn Bassett

University of BaselORCID 0000-0001-8535-725XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Approach:statistical model· 1

Frequent Co-Authors

Angelo Luiz AngoneziiD· 1 shared Aude AndriolloiD· 1 shared Grégory RothiD· 1 shared Jeffrey Alan ChaoiD· 1 shared Sébastien HerbertiD· 1 shared Susan E. MangoiD· 1 shared Tobias VerheijeniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Angelo Luiz AngoneziORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintMar 3, 2026

The One Click Wonder: a retrained automated segmentation pipeline that enables quantitative and modular analysis of C. elegans embryos

Palmer Carlyn Bassett, Tobias Verheijen, Angelo Luiz Angonezi…·Susan E. Mango

The paper introduces OCW, an automated segmentation pipeline for C. elegans embryos, and BAAM for single-cell quantitation, revealing distinct cell populations with varying transcriptional burst frequencies.

DOI 10.64898/2026.01.21.700865

C. elegansimaging

𝕏 PostBluesky