Bingqing Xie

The paper presents the Human Gut Cell Atlas v1.0, a unified reference of gut cell diversity, revealing how tissue structure influences cellular composition and enabling disease and organoid analysis.

This study shows that remodeled vessel geometry in hemodialysis patients promotes disturbed flow at pre-maturation flow rates, contributing to vascular pathologies.

The paper identifies non-responder-specific epithelial-stromal-immune ecosystems in Crohn's Disease using single-cell and spatial transcriptomics, linking them to treatment resistance.

The paper constructs a cell-type-resolved chromatin accessibility atlas in the human intestine and identifies regulatory programs and genetic variants associated with Crohn's disease.

The paper introduces mDrop-seq, a high-throughput scRNA-seq technique for yeast species, and demonstrates its use in profiling gene expression in Saccharomyces cerevisiae and Candida albicans under various conditions.

This study uses RNA-seq to compare retinal transcriptomes of germ-free and specific pathogen-free mice, identifying DEGs and pathways influenced by the gut microbiome.

The paper compares Drop-seq and DroNc-seq in profiling cardiomyocyte differentiation, finding similar cell types and trajectories in both methods.