Author

William D. Barshop

Thermo Fisher Scientific (United States)ORCID 0000-0001-9517-2339Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Andy S. MooniD· 1 shared Christine C. WuiD· 1 shared Diogo Borges LimaiD· 1 shared Emily S. Cheng· 1 shared Fan LiuiD· 1 shared James Akira WohlschlegeliD· 1 shared Jesse D. CanterburyiD· 1 shared Johannes BroichhageniD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperMicrobiology

Andy S. MoonORCID

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3 papers

Recent·Most cited

MicrobiologyMolecular Biology of the CellPeer-reviewedAug 6, 2025

Function and interactions of a protein bridge between the inner membrane complex and subpellicular microtubules in Toxoplasma gondii

Emily S. Cheng, Andy S. Moon, William D. Barshop…·Peter John Bradley

This study identifies IMT1 as a protein linking the inner membrane complex and subpellicular microtubules in Toxoplasma gondii, revealing its role in regulating cytoskeletal interactions.

3 citations

experimental assaycell type annotation

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BioinformaticsAnalytical ChemistryPeer-reviewedAug 1, 2023

Dynamic Data Independent Acquisition Mass Spectrometry with Real-Time Retrospective Alignment

Lilian R. Heil, Philip M. Remes, Jesse D. Canterbury…·Michael J. MacCoss

This paper introduces a dynamic DIA mass spectrometry method that improves quantitative sensitivity by adjusting MS/MS windows during chromatographic separation.

13 citations

proteomicsexperimental assay

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Systems BiologyAnalytical ChemistryPeer-reviewedMar 16, 2023

Real-time library search increases cross-link identification depth across all levels of sample complexity

Max Ruwolt, Yi He, Diogo Borges Lima…·Fan Liu

The paper introduces real-time library search (RTLS) to improve cross-link identification in XL-MS by leveraging intensity ratios of diagnostic peaks, enhancing identification depth in complex samples.

10 citations

E. coliproteomics

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