Author

Nguyen Thi Khanh Nhu

The University of QueenslandORCID 0000-0002-0158-850XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Nguyen Thi Khanh Nhu1 paper

Biology Disciplines

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Microbiology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Mark A. SchembriiD· 3 shared Brian M. FordeiD· 2 shared David L. PatersoniD· 2 shared Minh‐Duy PhaniD· 2 shared Patrick N. A. HarrisiD· 2 shared Adam IrwiniD· 1 shared Adam N Marin· 1 shared Brian S. LearmaniD· 1 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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3 shared papersMicrobiology

Mark A. SchembriORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 8, 2026

Cross-species convergence of surface polysaccharides shapes the virulence of an atypical carbapenem resistant uropathogenic Escherichia coli clone

Lachlan L. Walker, Zheng Jie Lian, Minh‐Duy Phan…·Mark A. Schembri

The paper identifies a new carbapenem-resistant E. coli clone, ST361, associated with UTI and shows its virulence is linked to surface polysaccharides and mobile genetic elements.

DOI 10.64898/2026.10.05.755231

E. coliwhole-genome sequencing

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 14, 2026

Paired in situ and molecular analyses identify mechanisms of pathogen persistence within environmental communities

Charles Nunez, Thomas D. Watts, Nguyen Thi Khanh Nhu…·Francesca L. Short

The paper identifies genes and mechanisms enabling pathogen persistence in freshwater ecosystems using paired in situ and molecular analyses of Escherichia, Klebsiella, and Enterococcus.

DOI 10.64898/2026.02.12.705432

𝕏 PostBluesky

BioinformaticsBMC GenomicsPeer-reviewedJun 25, 2021

MicroPIPE: An end-to-end solution for high-quality complete bacterial genome construction

Valentine Murigneux, Leah Wendy Roberts, Brian M. Forde…·Scott A. Beatson

MicroPIPE constructs high-quality bacterial genomes using ONT and Illumina sequencing with an automated pipeline.

49 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky