Valentine Murigneux

Massive genome reduction occurred prior to the origin of coral algal symbionts

The paper presents genome and transcriptome data from Effrenium voratum, showing genome reduction predates symbiosis in Symbiodiniaceae and highlights differences between free-living and symbiotic lineages.

The genome of the endangered Macadamia jansenii displays little diversity but represents an 1 important genetic resource for plant breeding

The paper reports a high-quality chromosome-level genome assembly of the endangered Macadamia jansenii, revealing low genetic diversity and identifying genes relevant to commercial traits and evolutionary studies.

MicroPIPE: An end-to-end solution for high-quality complete bacterial genome construction

MicroPIPE constructs high-quality bacterial genomes using ONT and Illumina sequencing with an automated pipeline.

Improvements in the Sequencing and Assembly of Plant Genomes

The paper compares recent long-read sequencing methods for plant genome assembly, finding that increased coverage improves assembly quality, though species-specific requirements exist.

Comparison of long read methods for sequencing and assembly of a plant genome

This study compares three long-read sequencing technologies for de novo assembly of the Macadamia jansenii genome, evaluating contiguity, accuracy, completeness, cost, and DNA requirements.

High-throughput multiplexed tandem repeat genotyping using targeted long-read sequencing

This paper develops a targeted long-read sequencing method for high-throughput tandem repeat genotyping, achieving high accuracy and scalability.