Ulrike Böhme

Apollo 3 is a new manual genome annotation tool that integrates with JBrowse 2, enabling multi-genome editing and synteny visualization.

This study uses AlphaFold 3 scores to assess gene model quality in three species, finding they strongly favor curated models and suggest combining scores from multiple tools improves accuracy.

The paper assembles the chromosomes of Schistosoma mansoni, revealing insights into the evolution of its ZW sex-determination system through gene annotation and synteny analysis.

This study analyzes P. vivax schizont transcriptomes from field isolates, revealing gene expression heterogeneity and identifying genes involved in host-parasite interactions.

The paper presents genomic and transcriptomic evidence showing Hepatocystis parasites are closely related to Plasmodium but lack blood replication and have lost genes involved in red blood cell invasion.

The paper reports the genome sequencing of two avian malaria parasites and identifies lineage-specific features associated with their evolution in birds and mammals.