Author

Laìa Masvidal

Science for Life LaboratoryORCID 0000-0002-0460-3058Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Christian OertliniD· 2 shared Julie Lorent· 2 shared Ola Segnestam LarssoniD· 2 shared Carl MurieiD· 1 shared Fernanda C. S. LupinacciiD· 1 shared Glaucia N. M. HajjiD· 1 shared Hermano Martins Bellato· 1 shared Ivan TopisirovićiD· 1 shared

Activity by Year

2017-2019 · peak 1/yr

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10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Christian OertlinORCID

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2 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedMar 28, 2019

Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq

Christian Oertlin, Julie Lorent, Valentina Gandin…·Ola Segnestam Larsson

The paper introduces anota2seq, an algorithm for analyzing translational efficiency from ribosome or polysome profiling data, revealing translational buffering and mTOR-dependent gene regulation.

107 citationstop 3%

bulk RNA-seqstatistical model

𝕏 PostBluesky

Molecular BiologyNucleic Acids ResearchPeer-reviewedOct 10, 2017

Polysome-profiling in small tissue samples

Shuo Liang, Hermano Martins Bellato, Julie Lorent…·Ola Segnestam Larsson

This paper presents an optimized non-linear sucrose gradient method for polysome-profiling that reduces sample handling and enables translatome analysis from small tissue samples and primary cells.

78 citations

humanbulk RNA-seq

𝕏 PostBluesky