Author

Fatima S. Ugur

University of California, San FranciscoORCID 0000-0002-0711-9042Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:benchmarking· 1 Approach:biophysical modeling· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Danielle L. SwaneyiD· 2 shared Kevin LouiD· 2 shared Shizhong A. DaiiD· 2 shared Advait SubramanianiD· 1 shared Alan D. FrankeliD· 1 shared Alexander M. WolffiD· 1 shared Alice Mac KainiD· 1 shared Alicia RichardsiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersSystems Biology

Danielle L. SwaneyORCID

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2 papers

Recent·Most cited

Systems BiologyNaturePeer-reviewedApr 30, 2020

✦ In-depth digest

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

David Ezra Gordon, Gwendolyn Μ. Jang, Mehdi Bouhaddou…·Natalia Jura

Affinity-purification mass spectrometry of 26 SARS-CoV-2 proteins in HEK293T cells yields 332 high-confidence host interactions and 67 druggable human proteins with known compounds.

4,405 citationstop 1%

humanvirus

𝕏 PostBluesky

BioinformaticsBiology OpenPeer-reviewedJul 15, 2018

Extending Chemical Perturbations Of The Ubiquitin Fitness Landscape In A Classroom Setting

David Mavor, Kyle A. Barlow, Daniel E. Asarnow…·James S. Fraser

The paper uses deep mutational scanning to explore how chemical perturbations affect ubiquitin's mutational tolerance, revealing sensitization of most positions except two.

25 citations

proteomicsdeep learning

𝕏 PostBluesky