Author

Tatsusada Okuno

Keio UniversityORCID 0000-0002-1208-936XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Hideki MochizukiiD· 2 shared Akari SuzukiiD· 1 shared Asian Immune Diversity Atlas Network· 1 shared Atsushi KumanogohiD· 1 shared Boxiang LiuiD· 1 shared Chung-Chau HoniD· 1 shared Daisuke MotookaiD· 1 shared Daisuke OkuzakiiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersImmunology

Hideki MochizukiORCID

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2 papers

Recent·Most cited

Spatial transcriptomics elucidates medulla niche supporting germinal center response in myasthenia gravis thymoma

Yoshiaki Yasumizu, Makoto Kinoshita, Martin Jinye Zhang, Daisuke Motooka, Koichiro Suzuki, Daisuke Okuzaki, Satoshi Nojima, Soichiro Funaki, Yasushi Shintani, Naganari Ohkura, Eiichi Morii, Tatsusada Okuno, Hideki Mochizuki

This study uses spatial transcriptomics to identify medullary niche features in thymoma and thymic hyperplasia associated with myasthenia gravis pathogenesis.

bioRxiv · Feb 5, 2024 · PreprintImmunology

Quantification of escape from X chromosome inactivation with single-cell omics datasets reveals heterogeneity across cell types and tissues

Yoshihiko Tomofuji, Ryuya Edahiro, Yuya Shirai, Kian Hong Kock, Kyuto Sonehara, Qingbo S. Wang, Shinichi Namba, Jonathan Moody, Yoshinari Ando, Akari Suzuki, Tomohiro Yata, Kotaro Ogawa, Ho Namkoong, Quy Xiao Xuan Lin, Eliora Violain Buyamin, , Yukinori Okada

The paper introduces scLinaX, a method to quantify X chromosome inactivation escape using scRNA-seq, revealing heterogeneity across cell types and tissues.

bioRxiv · Oct 14, 2023 · PreprintGenomics