Author

Brian E. Carlson

University of MichiganORCID 0000-0002-1353-5907Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Biophysics· 1 Physiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Assay:electrophysiology· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Tetsuro Wakatsuki· 2 shared Bernard de BonoiD· 1 shared David Phillip NickersoniD· 1 shared Dewan Mahabub SarwariD· 1 shared Elliot L. ElsoniD· 1 shared Farid AlisafaeiiD· 1 shared John H. GennariiD· 1 shared Koray AtalağiD· 1 shared

Activity by Year

2017-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiophysics

Tetsuro Wakatsuki

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Tension-Induced Stiffening of Cytoskeletal Components Regulates Cardiomyocyte Contractility

Mohammad Jafari, Sisir Datla, Elliot L. Elson, Brian E. Carlson, Tetsuro Wakatsuki, Farid Alisafaei

This study investigates how mechanical tension and cytoskeletal stiffening regulate cardiomyocyte contractility through a combined theoretical and experimental approach.

bioRxiv · Feb 28, 2025 · PreprintBiophysics

Model Annotation and Discovery with the Physiome Model Repository

Dewan Mahabub Sarwar, Reza Kalbasi, John H. Gennari, Brian E. Carlson, Maxwell Lewis Neal, Bernard de Bono, Koray Atalağ, Peter John Hunter, David Phillip Nickerson

The paper annotates biological models with semantic annotations and develops a web tool to help users discover relevant models in the Physiome Model Repository.

BMC Bioinformatics · Sep 6, 2019Peer-reviewedBioinformatics

Computational Model for Simulating Drug-Induced Arrhythmia Sensitivity of Human iPSC-derived Cardiomyocytes

Xin Gao, Yue Yin, Neil Daily, Tyler Engel, Li Pang, Brian E. Carlson, Tetsuro Wakatsuki

The paper develops a computational model of hiPSC-derived cardiomyocytes to simulate drug-induced arrhythmia sensitivity, incorporating differences in ion channel expression compared to adult cardiomyocytes.

bioRxiv · Dec 18, 2017 · PreprintPhysiology