Oliver Bader

The paper defines the pangenome of 372 Candida parapsilosis isolates, revealing low genetic diversity and identifying gene content variations associated with nitrogen metabolism.

The paper introduces a large mass spectra dataset for antimicrobial resistance prediction, evaluates its performance, and analyzes the impact of data heterogeneity on machine learning models.

The paper uses proteogenomics to assess CUG codon mistranslation in Candida albicans and finds no evidence of leucine mistranslation, instead showing ribosomal-level ambiguity and no correlation with pathogenicity.

This study analyzes genomic variation in Candida glabrata isolates, revealing evidence of mating and suggesting humans are a secondary niche for the yeast.