Author

Sean A. Bergin

University College DublinORCID 0000-0002-1034-8938Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:C. elegans· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Geraldine ButleriD· 3 shared Kenneth H. WolfeiD· 3 shared Adam P. RyaniD· 2 shared Bing ZhaiiD· 2 shared Florent MorioiD· 2 shared Jillian Scully· 2 shared Amelia E. BarberiD· 1 shared Carolin A. MülleriD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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3 shared papersGenomics

Geraldine ButlerORCID

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3 papers

Recent·Most cited

Small pangenome of Candida parapsilosis reflects overall low intraspecific diversity

Adam P. Ryan, Sean A. Bergin, Jillian Scully, Evelyn Zuniga‐Soto, Conor Hession, Amelia E. Barber, Emilia Gómez-Molero, Oliver Bader, Florent Morio, Bing Zhai, Kenneth H. Wolfe, Geraldine Butler

The paper defines the pangenome of 372 Candida parapsilosis isolates, revealing low genetic diversity and identifying gene content variations associated with nitrogen metabolism.

mBio · Aug 25, 2025Peer-reviewedGenomics

Analysis of clinical Candida parapsilosis isolates reveals copy number variation in key fluconazole resistance genes

Sean A. Bergin, Laura A. Doorley, Jeffrey M. Rybak, Kenneth H. Wolfe, Geraldine Butler, Christina A. Cuomo, Phillip David Rogers

The paper identifies copy number variations in fluconazole resistance genes in Candida parapsilosis isolates using whole-genome sequencing and GWAS.

Antimicrobial Agents and Chemotherapy · May 7, 2024Peer-reviewedGenomics

Resistance to miltefosine results from amplification of the RTA3 floppase or inactivation of flippases in Candida parapsilosis

Sean A. Bergin, Fang Zhao, Adam P. Ryan, Carolin A. Müller, Conrad A. Nieduszynski, Bing Zhai, Thierry Rolling, Tobias M. Hohl, Florent Morio, Jillian Scully, Kenneth H. Wolfe, Geraldine Butler

This study identifies that resistance to miltefosine in Candida parapsilosis arises from RTA3 gene amplification or flippase inactivation, altering plasma membrane lipid asymmetry.

bioRxiv · Dec 16, 2021 · PreprintGenomics