Author

Junyu Chen

University of CopenhagenORCID 0000-0002-1567-6498Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Junyu Chen2 papers · Sun Yat-sen University

Biology Disciplines

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Genomics· 1 Molecular Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Approach:experimental assay· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:development & morphogenesis· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Laura Arribas‐HernándeziD· 2 shared Peter BroderseniD· 2 shared Sarah RennieiD· 2 shared Anila GeorgeiD· 1 shared Daniel Flores-TélleziD· 1 shared James W. BrysoniD· 1 shared Jamie AuxillosiD· 1 shared Kresten Lindorff‐LarseniD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersPlant Biology

Laura Arribas‐HernándezORCID

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3 papers

Recent·Most cited

Systematic benchmark of demultiplexing workflows for direct RNA sequencing

James W. Bryson, Lena Bjørn Johansson, Anila George, Junyu Chen, Jamie Auxillos, Sarah Rennie

This study benchmarks two demultiplexing tools for direct RNA sequencing using IVT spike-ins and species identity, showing their performance differences and the need for calibration.

bioRxiv · Oct 10, 2026 · PreprintGenomics

PUMILIOs and m6A-ECT2/ECT3 share mRNA targets and exert opposing control over organogenesis

Junyu Chen, Marina Sangés Ametllé, Sarah Rennie, Laura Arribas‐Hernández, Peter Brodersen

The paper shows PUMILIO and m6A-YTHDF proteins share mRNA targets and have opposing roles in plant organogenesis.

bioRxiv · Oct 11, 2025 · PreprintPlant Biology

Insights into the conservation and diversification of the molecular functions of YTHDF proteins

Daniel Flores-Téllez, Mathias Due Tankmar, Sören von Bülow, Junyu Chen, Kresten Lindorff‐Larsen, Peter Brodersen, Laura Arribas‐Hernández

The paper investigates the molecular functions of YTHDF proteins across land plants, showing conserved ancestral functions and lineage-specific diversification in Arabidopsis.

PLoS Genetics · Oct 10, 2023Peer-reviewedMolecular Biology