Author

Andrew J. Martins

Yale UniversityORCID 0000-0002-1832-1924Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Organism:human· 2 Research Focus:batch correction / integration· 1 Approach:biophysical modeling· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Biqing ZhuiD· 1 shared Chia‐Yi LeeiD· 1 shared Cyprien A. RivieriD· 1 shared Esen SefikiD· 1 shared Fengrui ZhangiD· 1 shared John S. TsangiD· 1 shared Jonathan Howard DeLongiD· 1 shared Jordan S. PoberiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperNeuroscience

Biqing ZhuORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

ImmunologyProceedings of the National Academy of SciencesPeer-reviewedFeb 5, 2026

T Cell Receptors for Antigen on Intraepitheial Cytolytic T Lymphocytes in Celiac Disease Engage Enterocyte HLA-E and HLA-B

Justin E. Johnson, Kriti Agrawal, Rafia S. Al‐Lamki…·Jordan S. Pober

This study identifies IFNγ-producing intraepithelial CTLs in celiac disease that interact with HLA-E/B on enterocytes, promoting CTL recruitment and epithelial killing.

1 citation

humanscRNA-seq

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NeurosciencebioRxivPreprintDec 6, 2024

Single-nucleus RNA sequencing of human periventricular white matter in vascular dementia

Sebastián Díaz-Pérez, Jonathan Howard DeLong, Cyprien A. Rivier…·Lauren Hachmann Sansing

This study uses single-nucleus RNA sequencing to analyze periventricular white matter in vascular dementia, identifying increased heat shock protein responses as a conserved feature across cell types.

4 citations

humansnRNA-seq

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BioinformaticsNature CommunicationsPeer-reviewedApr 19, 2022

Normalizing and denoising protein expression data from droplet-based single cell profiling

Matthew P. Mulè, Andrew J. Martins, John S. Tsang

The paper identifies noise sources in CITE-seq data and provides an R package to denoise and normalize it.

197 citationstop 1%

CITE-seqstatistical model

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