Author

Xi Liu

BGI Group (China)ORCID 0000-0002-1901-1506Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Xi Liu6 papers · Centre National de la Recherche Scientifique

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Organism:plant (other)· 1 Research Focus:protein design· 1

Frequent Co-Authors

Chao CheniD· 1 shared Chunlei ZhouiD· 1 shared Fei TangiD· 1 shared Feixue LiiD· 1 shared Hao WangiD· 1 shared Jianmin WaniD· 1 shared Jie Lan· 1 shared Jun SuniD· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperBioinformatics

Chao ChenORCID

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3 papers

Recent·Most cited

Structural and functional insights into the type III-E CRISPR-Cas immunity

Xi Liu, Laixing Zhang, Hao Wang, Yu Xiu, Ling Huang, Zhengyu Gao, Ningning Li, Feixue Li, Weijia Xiong, Teng Fei Gao, Yi Zhang, Maojun Yang, Yue Feng

This study reveals the structural and functional mechanisms of the type III-E CRISPR-Cas system by analyzing gRAMP-crRNA complexes and their interactions with target RNA.

bioRxiv · Aug 22, 2022 · PreprintMolecular Biology

PSEA: A phenotypic similarity ensemble approach for prioritizes candidate genes to aid mendelian disease diagnosis

Zhonghua Wang, Lipei Liu, Chao Chen, Xi Liu, Fei Tang, Yixiang Zhang, Yunmei Chen, Yaoshen Wang, Jun Sun, Zhiyu Peng

PSEA prioritizes candidate genes for mendelian disease diagnosis by improving phenotypic similarity evaluation using HPO terms and showing better performance than existing methods.

bioRxiv · Oct 13, 2021 · PreprintBioinformatics

WSL5, a pentatricopeptide repeat protein, is essential for chloroplast biogenesis in rice under cold stress

Xi Liu, Jie Lan, Yunshuai Huang, Penghui Cao, Chunlei Zhou, Yaken Ren, Niqing He, Shijia Liu, Yunlu Tian, Thanhliem Nguyen, Ling Jiang, Jianmin Wan

This study identifies WSL5, a pentatricopeptide repeat protein in rice, essential for chloroplast biogenesis under cold stress, showing defects in gene editing and splicing.

Journal of Experimental Botany · Jun 8, 2018Peer-reviewedGenetics