Author

Kirk B. Jensen

AGRF LtdORCID 0000-0002-2084-1734Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Jasmine PlummeriD· 2 shared Kellie WiseiD· 2 shared Lisa M. ButleriD· 2 shared Luciano Gastón MartelottoiD· 2 shared Natalie K. Ryan· 2 shared Azucena SalasiD· 1 shared David P. CookiD· 1 shared Doménica MarcheseiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersBioinformatics

Jasmine PlummerORCID

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2 papers

Recent·Most cited

BioinformaticsGenome biologyPeer-reviewedMar 29, 2024

FixNCut: Single-cell genomics through reversible tissue fixation and dissociation

Laura Jiménez-Gracia, Doménica Marchese, Juan Camilo Nieto…·Luciano Gastón Martelotto

FixNCut is a reversible fixation and dissociation method that preserves RNA integrity and cellular composition in human and mouse tissues, enabling robust single-cell and spatial analyses.

25 citations

humanmouse

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 13, 2023

A Comparative Analysis of Imaging-Based Spatial Transcriptomics Platforms

David P. Cook, Kirk B. Jensen, Kellie Wise…·Luciano Gastón Martelotto

Head-to-head on serial prostate adenocarcinoma sections: Xenium gave higher sensitivity, wider dynamic range and closer agreement with snRNA-seq; CosMx segmented cells better out of the box.

68 citations

humanspatial transcriptomics

𝕏 PostBluesky