Author

Naoya Miyashita

Duke UniversityORCID 0000-0002-2464-5167Unclaimed ORCID profile · follow to get notified of new preprints

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Naoya Miyashita1 paper

Biology Disciplines

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Cell Biology· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Purushothama Rao TataiD· 3 shared Aleksandra TataiD· 2 shared Jeremy M. MorowitziD· 2 shared Rhianna E. LeeiD· 2 shared Aditya PratapaiD· 1 shared Alessandra Livraghi-ButricoiD· 1 shared Allison B. Williams· 1 shared Anne Marie Cawley· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersCell Biology

Purushothama Rao TataORCID

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3 papers

Recent·Most cited

Molecular BiologybioRxivPreprintSep 11, 2026

Alveolar Cytochrome P450 Mediates Butylated Hydroxytoluene-Induced Electrophilic Injury and Apoptosis

Michael T. Forrester, Katherine Harbaugh, Naoya Miyashita…·Purushothama Rao Tata

The paper identifies CYP2B10 as the enzyme that activates BHT into a toxic quinone methide, leading to apoptosis and lung damage in mice.

DOI 10.64898/2026.09.08.750144

mousebulk RNA-seq

𝕏 PostBluesky

Cell BiologybioRxivPreprintJun 25, 2026

TP53-mediated bidirectional lineage plasticity drives alveolar epithelial cell extrusion and tissue remodeling

Jeremy M. Morowitz, Thomas J. Whitlow, Naoya Miyashita…·Purushothama Rao Tata

The paper identifies TP53 activation in alveolar epithelial cells as a driver of cell extrusion and tissue remodeling in IPF through bidirectional lineage plasticity.

DOI 10.64898/2026.06.24.732965

humanbulk RNA-seq

𝕏 PostBluesky

Cell BiologybioRxivPreprintJun 19, 2026

Region-specific molecular regulatory programs define epithelial identity, progenitor states, and mucus homeostasis in human distal airways

Hiroaki Murano, Nathanial C. Stevens, Hong Dang…·Kenichi Okuda

The paper identifies region-specific molecular regulatory programs in human distal airways that maintain epithelial identity and mucus homeostasis, revealing mechanisms for mucociliary defense.

DOI 10.64898/2026.06.15.732400

humanbulk RNA-seq

𝕏 PostBluesky