Author

Xindong Liu

Army Medical UniversityORCID 0000-0002-2465-0337Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1

Frequent Co-Authors

Biao ZhangiD· 1 shared Bin SuiD· 1 shared Bin TianiD· 1 shared Bin ZouiD· 1 shared Bing SuiD· 1 shared Bingyu CheniD· 1 shared Botong LiiD· 1 shared Chen W. JiangiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperGenomics

Biao ZhangORCID

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3 papers

Recent·Most cited

Amd1-skp2 cascade regulates hepatocyte proliferation during liver growth and hepatocellular carcinoma development in zebrafish

Ke Zhang, Botong Li, Zhiling Deng, Yong Dong, Yuanyuan Li, Bingyu Chen, Ming Zhao, Mao Lu, Xindong Liu, Zhenhua Guo, Sizhou Huang

bioRxiv · May 25, 2024 · PreprintDevelopmental Biology

SCAPTURE: a deep learning-embedded pipeline that captures polyadenylation information from 3' tag-based RNA-seq of single cells

Guo‐Wei Li, Nan Fang, Guo-Hua Yuan, Chu‐Xiao Liu, Xindong Liu, Ling‐Ling Chen, Bin Tian, Li Chun Yang

SCAPTURE identifies and quantifies cleavage and polyadenylation sites from 3' tag-based scRNA-seq, improving cell identity refinement.

Genome biology · Aug 10, 2021Peer-reviewedBioinformatics

Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients

Xianwen Ren, Wen Wen, Xiaoying Fan, Wenhong Hou, Bin Su, Pengfei Cai, Jiesheng Li, Yang Liu, Fei Tang, Fan Zhang, Yu Yang, Jiangping He, Wenji Ma, Jingjing He, Pingping Wang, , Zemin Zhang

This study uses single-cell RNA sequencing to analyze immune responses in COVID-19 patients, identifying key immune cell changes and molecular pathways linked to disease severity.

bioRxiv · Oct 29, 2020 · PreprintGenomics