Author

Julia Gehrmann

RWTH Aachen UniversityORCID 0000-0002-4101-5458Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Ivan G. CostaiD· 2 shared Amin RavaeiiD· 1 shared Can Bora YildiziD· 1 shared Chao‐Chung KuoiD· 1 shared Daniel PensoldiD· 1 shared Eduardo Gade GusmaoiD· 1 shared Fabio TicconiiD· 1 shared Geraldine Zimmer‐BenschiD· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMolecular Biology

Ivan G. CostaORCID

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2 papers

Recent·Most cited

EphrinA5 regulates cell motility by modulating the targeting of DNMT1 to the Ncam1 promoter via lncRNA/DNA triplex formation

Can Bora Yildiz, Tathagata Kundu, Julia Gehrmann, Jannis Koesling, Amin Ravaei, Mira Jakovcevski, Daniel Pensold, Olav Zimmermann, Giulia Rossetti, Ivan G. Costa, Geraldine Zimmer‐Bensch

The paper shows ephrinA5 reduces cell motility by decreasing Snhg15 expression, which lowers DNMT1 binding to the Ncam1 promoter, reducing methylation and increasing Ncam1 expression.

bioRxiv · Mar 25, 2023 · PreprintMolecular Biology

RGT: a toolbox for the integrative analysis of high throughput regulatory genomics data

Zhijian Li, Chao‐Chung Kuo, Fabio Ticconi, Mina Shaigan, Julia Gehrmann, Eduardo Gade Gusmao, Manuel Allhoff, Martin Manolov, Martin Zenke, Ivan G. Costa

RGT is a Python package for integrative analysis of regulatory genomics data, offering tools for peak calling, binding site prediction, and regulatory factor association.

BMC Bioinformatics · Mar 6, 2023Peer-reviewedBioinformatics