Author

Caitlin Bourke

Charles Darwin UniversityORCID 0000-0002-4466-6563Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Aaron R. JexiD· 1 shared Abdul Marsudi Manah· 1 shared Amélie VantauxiD· 1 shared Anisah Jantim· 1 shared Anthony A. RubertoiD· 1 shared Benoît WitkowskiiD· 1 shared Bridget E. BarberiD· 1 shared CHRIS J. DRAKELEYiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Aaron R. JexORCID

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2 papers

Recent·Most cited

Integrative genomics of Plasmodium knowlesi reveals parasite-intrinsic regulators of severe human malaria

Jacob A. F. Westaway, Ernest Diez Benavente, Michal Kucharski, Sourav Nayak, Duong TQ Huy, Sarah Auburn, Timothy William, Giri Shan Rajahram, Kim A. Piera, Hidayat Trimarsanto, Kian Soon Hoon, Caitlin Bourke, Anisah Jantim, Abdul Marsudi Manah, William Gotulis, , Matthew J. Grigg

This study identifies parasite-intrinsic transcriptional programs associated with severe P. knowlesi malaria through integrative GWAS, transcriptomic, and eQTL analyses of clinical isolates.

bioRxiv · Mar 23, 2026 · PreprintGenomics

Single-cell RNA sequencing of Plasmodium vivax sporozoites reveals stage- and species-specific transcriptomic signatures

Anthony A. Ruberto, Caitlin Bourke, Amélie Vantaux, Steven P. Maher, Aaron R. Jex, Benoît Witkowski, Georges Snounou, Ivo Müeller

This study uses single-cell RNA sequencing to analyze P. vivax sporozoites, identifying stage-specific transcriptomic signatures and gene usage patterns distinct from P. falciparum.

PLoS neglected tropical diseases · Aug 4, 2022Peer-reviewedGenomics