Author
Agricultural Genomics Institute at ShenzhenORCID 0000-0002-4538-4349Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Chao Wang, Bowen Lei, Yongzhou Bao, Zhen Wang, Choulin Chen, Yuanyuan Zhang, Shenghua Qin, Tao Sun, Zhonglin Tang, Yuwen Liu
This study identifies cis-regulatory roles of transposable elements in livestock genomes using multi-omics data and a novel computational framework.
iScience · Feb 18, 2025Peer-reviewedGenomics
Guohao Han, Peng Yang, Yongjin Zhang, Qiaowei Li, Xinhao Fan, Ruipu Chen, Chao Yan, Mu Zeng, Yalan Yang, Zhonglin Tang
PIGOME is a multi-omics database for pig functional genomics that integrates various sequencing datasets and provides tools for exploring genomic variants, gene expression, and epigenetic signals.
Genomics Proteomics & Bioinformatics · Feb 1, 2025Peer-reviewedBioinformatics
Jinyan Teng, Yahui Gao, Hongwei Holly Yin, Zhonghao Bai, Shuli Liu, Haonan Zeng, Lijing Bai, Zexi Cai, Bingru Zhao, Xiujin Li, Zhiting Xu, Qing Lin, Zhangyuan Pan, Wenjing Yang, Xiaoshan Yu, , George E. Liu
The paper presents PigGTEx, a resource linking genetic variants to transcriptomic phenotypes in pigs, showing pigs' similarity to humans in gene regulation and complex traits.
Nature Genetics · Jan 1, 2024Peer-reviewedGenomics
Guoqiang Yi, Lei Liu, Yilong Yao, Yuwen Liu, Jiang Li, Yalan Yang, Lingzhao Fang, Delin Mo, Longchao Zhang, Yonggang Liu, Yongchao Niu, Liyuan Wang, Xiaolu Qu, Zhangyuan Pan, Lei Wang, , Zhonglin Tang
This study identifies selection signatures and loci associated with complex traits in pigs by analyzing multi-omics data from Eastern and Western breeds.
bioRxiv · Sep 19, 2023 · PreprintGenomics
Xinxin Zhang, Yilong Yao, Jinghua Han, Yalan Yang, Yun Chen, Zhonglin Tang, Fei Gao
The paper investigates the role of m6A methylation in prenatal skeletal muscle development in pigs using transcriptome-wide profiling and identifies its regulatory impact on myogenesis.
bioRxiv · Dec 27, 2019 · PreprintGenetics
Yalan Yang, Jinmin Lian, Bingkun Xie, Muya Chen, Yongchao Niu, Qiaowei Li, Yuwen Liu, Guoqiang Yi, Xinhao Fan, Yijie Tang, Jiang Li, Ivan Liachko, Shawn T Sullivan, Bradley J. Nelson, Erwei Zuo, Zhonglin Tang
The paper presents a high-quality phased chromosome-scale genome assembly of a Chinese indigenous pig and identifies genetic differences between this breed and Duroc pigs.
bioRxiv · Sep 16, 2019 · PreprintGenomics