Author

Patricia Ho

Columbia University Irving Medical CenterORCID 0000-0002-4622-8188Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:scRNA-seq· 2 Assay:CITE-seq· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Benjamin IzariD· 2 shared Johannes C. MelmsiD· 2 shared Adrienne LuomaiD· 1 shared Alison Marie TayloriD· 1 shared Amit Dipak AminiD· 1 shared Anthony J. GarrityiD· 1 shared Antoni RibasiD· 1 shared Asaf RotemiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersGenomics

Benjamin IzarORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintFeb 13, 2022

Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications

Yiping Wang, Joy Linyue Fan, Johannes C. Melms…·Benjamin Izar

This study develops a method for single-cell and whole-genome sequencing of frozen clinical specimens, demonstrating its utility in analyzing tumor evolution and rare disease biospecimens.

3 citations

humanscRNA-seq

𝕏 PostBluesky

GenomicsNature GeneticsPeer-reviewedMar 1, 2021

Multi-modal pooled Perturb-CITE-Seq screens in patient models define novel mechanisms of cancer immune evasion

Chris J. Frangieh, Johannes C. Melms, Pratiksha I. Thakore…·Benjamin Izar

The paper uses Perturb-CITE-Seq to identify novel immune evasion mechanisms in cancer by analyzing multi-modal single-cell data from patient-derived models.

276 citationstop 1%

humanscRNA-seq

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GenomicsbioRxivPreprintSep 9, 2019

CloneRetriever: retrieval of rare clones from heterogeneous cell populations

David Feldman, FuNien Tsai, Anthony J. Garrity…·Paul C. Blainey

CloneRetriever identifies and retrieves rare clones from heterogeneous populations to study clonal fitness and selection mechanisms.

2 citations

experimental assay

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