Author

Cassandra Kontur

Yale UniversityORCID 0000-0002-4844-3711Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Cassandra Kontur1 paper

Biology Disciplines

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Developmental Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:long-read sequencing· 2 Organism:zebrafish· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Anna Delgado-TejedoriD· 2 shared Eva Maria NovoaiD· 2 shared Jean-Denis BeaudoiniD· 2 shared Adnan Muhammad NiaziiD· 1 shared Antonio J. GiráldeziD· 1 shared Eivind ValeniD· 1 shared Gregor DiensthuberiD· 1 shared Huanle LiuiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersDevelopmental Biology

Anna Delgado-TejedorORCID

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2 papers

Recent·Most cited

Single-molecule m6A profiling reveals position-dependent mRNA regulation and non-canonical roles for Ythdf2 in early embryogenesis

Sarah A. Alshawi, Anna Delgado-Tejedor, Srihari Madhavan, Laia Llovera, Rebeca Medina, Cassandra Kontur, Eva Maria Novoa, Jean-Denis Beaudoin

The paper uses single-molecule m6A profiling to study mRNA regulation during zebrafish MZT, finding m6A's role in mRNA decay and poly(A) tail dynamics.

bioRxiv · Jul 6, 2026 · PreprintDevelopmental Biology

Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing

Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J. Giráldez, Jean-Denis Beaudoin, John S. Mattick, Eva Maria Novoa

Nano3P-seq quantifies RNA abundance, tail composition, and tail length dynamics at single-read resolution without PCR or adapters.

Nature Methods · Dec 19, 2022Peer-reviewedMolecular Biology