Author

Dimitri Desvillechabrol

Institut PasteurORCID 0000-0002-4947-7876Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:software / tool· 3 Research Focus:benchmarking· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Assay:long-read sequencing· 1 Approach:matrix factorization· 1

Frequent Co-Authors

Thomas CokelaeriD· 4 shared Christiane BouchieriD· 2 shared Sean KennedyiD· 2 shared Amandine PerriniD· 1 shared Anne BitoniD· 1 shared Bertrand NéroniD· 1 shared Blaise LiiD· 1 shared Bryan BrancotteiD· 1 shared

Activity by Year

2016-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersBioinformatics

Thomas CokelaerORCID

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Author profile →

4 papers

Recent·Most cited

LORA: a polymorphic multi-sample LOng Read Assembly pipeline.

Dimitri Desvillechabrol, Rania Ouazahrou, Juliana Pipoli da Fonseca, Gerald Frank Späth, Thomas Cokelaer

LORA is a long-read genome assembly pipeline that integrates multiple assemblers and provides quality assessment tools, demonstrating its use on bacterial and eukaryotic genomes.

NAR Genomics and Bioinformatics · Mar 27, 2026Peer-reviewedBioinformatics

BioConvert: a comprehensive format converter for life sciences

Hugo Caro, Sulyvan Dollin, Anne Biton, Bryan Brancotte, Dimitri Desvillechabrol, Yoann Dufresne, Blaise Li, Étienne Kornobis, Frédéric Lemoine, Nicolas Maillet, Amandine Perrin, Nicolas Traut, Bertrand Néron, Thomas Cokelaer

BioConvert simplifies life science data format conversion by aggregating tools and providing a unified interface, supporting 50 formats and 100 conversions.

NAR Genomics and Bioinformatics · Jul 5, 2023Peer-reviewedBioinformatics

Sequanix: A Dynamic Graphical Interface for Snakemake Workflows

Dimitri Desvillechabrol, Rachel Legendre, Claire Rioualen, Christiane Bouchier, Jacques van Helden, Sean Kennedy, Thomas Cokelaer

Sequanix provides a graphical interface for Snakemake workflows to make them more accessible to a broader audience.

Bioinformatics · Jan 18, 2018Peer-reviewedBioinformatics

Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach.

Dimitri Desvillechabrol, Christiane Bouchier, Sean Kennedy, Thomas Cokelaer

The paper introduces a method to detect and characterize low and high coverage regions in genomes using a running median and double threshold approach.

bioRxiv · Dec 8, 2016 · PreprintBioinformatics