Bertrand Néron

The paper introduces DefenseFinder, a resource for antiphage defense systems, including a web service, wiki, and databases with structure predictions.

The paper demonstrates that integron integrase can insert cassettes outside classical att sites, leading to new recombination sites called attG and expanding integron roles in bacterial evolution.

BioConvert simplifies life science data format conversion by aggregating tools and providing a unified interface, supporting 50 formats and 100 conversions.

MacSyFinder v2 improves molecular system detection in microbial genomes with enhanced modeling, search engine, and updated models.

IntegronFinder 2.0 identifies and analyzes integrons in bacterial genomes, revealing a large diversity of integrons and antibiotic resistance genes in Klebsiella pneumoniae.

The paper shows that antisense transcription represses up to 30% of the least expressed genes in budding yeast, particularly those enriched in quiescence.

The paper identifies integrons and cassette arrays in bacterial genomes, revealing their distribution patterns and evolutionary implications.

The paper develops models to identify protein secretion systems in bacterial genomes, finding T1SS and T5SS are most common, while T6SSiii and T9SS are restricted to Bacteroidetes.