Author

Anna Neubauer

German Center for Neurodegenerative DiseasesORCID 0000-0002-5102-2491Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Aleksej Frolov· 2 shared Jannis Bastian SpintgeiD· 2 shared Joachim Ludwig SchultzeiD· 2 shared Lorenzo BonaguroiD· 2 shared Marc BeyeriD· 2 shared Anna C. AschenbrenneriD· 1 shared Anna F. Lindemann· 1 shared Annika E. SpottkeiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersImmunology

Aleksej Frolov

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Author profile →

3 papers

Recent·Most cited

Downregulation of Satb1 is required to prevent autoimmunity by maintaining Tfh homeostasis

Mehrnoush Hadaddzadeh Shakiba, Maren Köhne, Tarek Elmzzahi, Luisa Bach, Doaa Hamada, Leonie Heyden, Anna F. Lindemann, Jannis Bastian Spintge, Aleksej Frolov, Yuanfang Li, Lisa Holsten, Marlene Gottschalk, Celia Kho, Darya Malko, Collins Osei-Sarpong, , Marc Beyer

This study shows that Satb1 downregulation prevents autoimmunity by maintaining Tfh cell homeostasis and preventing excessive GC formation and auto-antibody secretion.

bioRxiv · Feb 5, 2026 · PreprintImmunology

Unveiling the Power of High-Dimensional Cytometry Data with cyCONDOR

Charlotte Kröger, Sophie Merit Müller, Jacqueline Leidner, Theresa Kröber, Stefanie Warnat‐Herresthal, Jannis Bastian Spintge, Timo Zajac, Anna Neubauer, Aleksej Frolov, Caterina Carraro, DELCODE Study Group, Silka Dawn Freiesleben, Slawek Altenstein, Boris‐Stephan Rauchmann, Ingo Kilimann, , Lorenzo Bonaguro

The paper introduces cyCONDOR, a computational framework for high-dimensional cytometry data analysis, offering scalable and user-friendly tools for preprocessing, clustering, and downstream biological interpretation.

Nature Communications · Dec 19, 2024Peer-reviewedBioinformatics

Nitrogen starvation response in hornworts and liverworts provides little evidence for complex priming to the cyanobiont

Yuling Yue, Gaurav Sablok, Anna Neubauer, Jaakko Hyvönen, Péter Szövényi

The paper examines the transcriptional response to nitrogen starvation in hornworts and liverworts, finding little evidence for specific priming to cyanobacteria and suggesting attraction of the cyanobiont is key for symbiosis.

bioRxiv · May 22, 2024 · PreprintEvolutionary Biology