Author

Lucinda K. Barrett

Oxford University Hospitals NHS TrustORCID 0000-0002-5680-322XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Gillian RodgeriD· 2 shared Nicole E StoesseriD· 2 shared Samuel LipworthiD· 2 shared Sarah J OakleyiD· 2 shared Ann Sarah WalkeriD· 1 shared Aysha Roohi· 1 shared David W. EyreiD· 1 shared Derrick W. CrookiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

Gillian RodgerORCID

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2 papers

Recent·Most cited

E. coli phylogeny drives co-amoxiclav resistance through variable expression of blaTEM-1

William Matlock, Gillian Rodger, Emma Pritchard, Matthew Colpus, Natalia Kapel, Lucinda K. Barrett, Marcus R. Morgan, Sarah J Oakley, Katie L. Hopkins, Aysha Roohi, Drosos E. Karageorgopoulos, Matthew B. Avison, Ann Sarah Walker, Samuel Lipworth, Nicole E Stoesser

The paper shows that E. coli phylogeny influences blaTEM-1 expression and co-amoxiclav resistance through lineage-specific regulatory differences.

Nature Communications · Sep 30, 2025Peer-reviewedMicrobiology

Comparison of direct cDNA and PCR-cDNA Nanopore sequencing of Escherichia coli isolates

Gillian Rodger, Samuel Lipworth, Lucinda K. Barrett, Sarah J Oakley, Derrick W. Crook, David W. Eyre, Nicole E Stoesser

This paper compares direct cDNA and PCR-cDNA Nanopore sequencing of E. coli isolates, finding PCR-based amplification improves yield but introduces minor GC-content bias.

bioRxiv · Jan 23, 2024 · PreprintMolecular Biology