Author

Atsushi Nakanishi

Takeda (Japan)ORCID 0000-0002-5939-8530Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Approach:Bayesian inference· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alborz Mazloomian· 1 shared Atsushi Doi· 1 shared Damian YapiD· 1 shared Hideyuki OkanoiD· 1 shared Kazuhiro Ogi· 1 shared Masahiro NogamiiD· 1 shared Masashi AokiiD· 1 shared Masato YanoiD· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Alborz Mazloomian

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2 papers

Recent·Most cited

Identification of hub molecules of FUS-ALS by Bayesian gene regulatory network analysis of iPSC model: iBRN

Masahiro Nogami, Mitsuru Ishikawa, Atsushi Doi, Osamu Sano, Takefumi Sone, Tetsuya Akiyama, Masashi Aoki, Atsushi Nakanishi, Kazuhiro Ogi, Masato Yano, Hideyuki Okano

The paper uses iBRN to identify hub molecules in FUS-ALS, finding miR-125b-5p-TIMELESS and PRKDC as key regulators of DNA repair and stress granule formation.

Neurobiology of Disease · Apr 20, 2021Peer-reviewedNeuroscience

EIF4A3 associated splicing and nonsense mediated decay defined by a systems analysis with novel small molecule inhibitors

Alborz Mazloomian, Shinsuke Araki, Momoko Ohori, Damian Yap, Shoichi Nakao, Atsushi Nakanishi, Sohrab P. Shah, Samuel A. J. R. Aparicio

The paper defines eIF4A3's role in splicing and NMD through a systems analysis using novel small molecule inhibitors and shows its link to cell cycle regulation.

bioRxiv · Sep 15, 2017 · PreprintGenomics