Author

Andrea M. Kaminski

National Institute of Environmental Health SciencesORCID 0000-0002-6263-4186Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:protein structure prediction· 2 Organism:bacteria (other)· 1 Assay:cryo-EM· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Approach:simulation· 1 Approach:statistical model· 1

Frequent Co-Authors

Lars Christian PederseniD· 2 shared Alan E. TomkinsoniD· 1 shared Alex VogtiD· 1 shared Danny LaurentiD· 1 shared Jason G. Williams· 1 shared Lalith PereraiD· 1 shared Libertad Garcı́a-VilladaiD· 1 shared Natalya P. DegtyarevaiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBiophysics

Lars Christian PedersenORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

End Processing in NHEJ by Polymerase {lambda} and PNKP is coordinated during short-range synapsis

Alex Vogt, Andrea M. Kaminski, Jason G. Williams, Tasmin Naila, Danny Laurent, Alan E. Tomkinson, Susan P. Lees‐Miller, Lars Christian Pedersen, Thomas A. Kunkel, Yuan He

The paper determines the cryo-EM structure of Pol λ bound to the short-range synaptic complex, revealing its recruitment mechanism and coordinated activity with PNKP in NHEJ end processing.

Nature Communications · Sep 9, 2026Peer-reviewedBiophysics

Structural and Computational Analysis of Pseudomonas Aeruginosa DNA Gyrase Reveals Molecular Characteristics That May Contribute to Ciprofloxacin Resistance

Lalith Perera, Libertad Garcı́a-Villada, Andrea M. Kaminski, Natalya P. Degtyareva, L.G. Pedersen, Paul W. Doetsch

The paper analyzes the molecular mechanisms of ciprofloxacin resistance in Pseudomonas aeruginosa by solving the gyrase structure and performing MD simulations of wild-type and mutant systems.

Biomolecules · Feb 18, 2026Peer-reviewedMolecular Biology