Allison Marie Greaney

The paper identifies a conserved tissue-level stress response to proteolytic damage, characterized by heme release and oxidative stress, and shows how alveolar macrophages and fibroblasts respond to mitigate damage.

This study characterizes epithelial cell states emerging from reprogramming in a pulmonary bioengineering context.

This study develops an engineered whole-lung tissue model to study tissue organization and alveolar barrier function, showing improved barrier function with alveolar macrophages.

The paper identifies cell-to-cell communication between mesothelial cells and alveolar tuft cells that regulates lung regeneration after pneumonectomy.

The paper analyzes single-cell RNA sequencing data from early SARS-CoV-2 infection in a humanized model to show how the virus exploits tissue repair mechanisms in airway epithelial cells.

Connectome quantifies and visualizes cell-cell signaling networks from single-cell RNA-sequencing data using a software package for R.